STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (430 aa)    
Predicted Functional Partners:
SNRPC
U1 small nuclear ribonucleoprotein C isoform X1.
   
 0.984
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.978
SNRPD1
Small nuclear ribonucleoprotein Sm D1 isoform X1.
   
 0.973
SNRPD2
Small nuclear ribonucleoprotein Sm D2.
   
 0.958
ENSPCIP00000041923
annotation not available
   
 0.958
ENSPCIP00000022515
annotation not available
   
 0.951
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.951
RBM25
RNA-binding protein 25 isoform X1.
   
 
 0.946
ENSPCIP00000005632
Small nuclear ribonucleoprotein-associated protein N isoform X1.
   
 0.937
SNRPB
Small nuclear ribonucleoprotein-associated proteins B and B' isoform X1.
   
 0.937
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.