STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXA3Forkhead box protein A3, hepatocyte nuclear factor 3-gamma. (365 aa)    
Predicted Functional Partners:
GATA1
Erythroid transcription factor isoform X1.
  
 0.648
GATA6
Transcription factor GATA-6 isoform X1.
   
 0.637
HHEX
Hematopoietically-expressed homeobox protein HHEX.
   
  
 0.596
GATA4
Transcription factor GATA-4.
   
 0.588
HNF1A
HNF1 homeobox A.
   
 
 0.583
NRIP1
Nuclear receptor-interacting protein 1.
     
 0.567
GATA5
Transcription factor GATA-5 isoform X1.
   
 0.519
NKX2-2
Homeobox protein Nkx-2.2.
   
 
 0.511
HNF1B
Transcription factor 2, hepatocyte nuclear factor 1-beta.
   
 
 0.502
TRPS1
Zinc finger transcription factor Trps1 isoform X1.
   
 0.495
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.