STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000009385Charged multivesicular body protein 1b-2. (199 aa)    
Predicted Functional Partners:
CHMP2A
Charged multivesicular body protein 2A.
   
0.994
VTA1
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein VTA1 homolog.
    
 0.993
VPS4A
Vacuolar protein sorting-associated protein 4A.
   
 0.985
VPS4B
Vacuolar protein sorting-associated protein 4B.
   
 0.983
CHMP2B
Charged multivesicular body protein 2B.
   
 0.959
CHMP5
Charged multivesicular body protein 5.
   
 
 0.937
CHMP3
Charged multivesicular body protein 3.
 
 
 0.935
CHMP1A
Charged multivesicular body protein 1a.
  
  
 
0.902
IST1
Vacuolar protein sorting-associated protein IST1.
    
 
 0.825
ENSPCIP00000036804
annotation not available
    
 
 0.825
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.