STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000009904Coiled-coil domain-containing protein 115-like. (239 aa)    
Predicted Functional Partners:
SERGEF
LOW QUALITY PROTEIN: secretion-regulating guanine nucleotide exchange factor.
      
 0.692
WDR7
WD repeat-containing protein 7 isoform X1.
      
 0.682
ATP6V1H
V-type proton ATPase subunit H isoform X1.
    
 
 0.676
SUSD1
Sushi domain-containing protein 1.
    
 
 0.666
ATP6V0D2
V-type proton ATPase subunit d 2 isoform X1.
    
 
 0.648
ATP6V0D1
V-type H+-transporting ATPase subunit d.
    
 
 0.648
ATP6AP2
Renin receptor.
    
 
 0.638
ENSPCIP00000015071
annotation not available
     
 0.616
ATP6AP1
V-type H+-transporting ATPase S1 subunit.
     
 0.616
MED7
Mediator of RNA polymerase II transcription subunit 7.
   
 0.609
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.