STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBAC2Ubiquitin-associated domain-containing protein 2. (345 aa)    
Predicted Functional Partners:
FAF2
FAS-associated factor 2 isoform X1.
    
 
 0.968
NPLOC4
Nuclear protein localization protein 4 homolog isoform X1.
    
 
 0.946
UFD1
Ubiquitin fusion degradation protein 1 homolog.
    
 
 0.939
UBXN8
UBX domain-containing protein 8.
    
 
 0.889
FAF1
FAS-associated factor 1 isoform X1.
    
 
 0.834
FAAP100
Fanconi anemia core complex-associated protein 100 isoform X1.
    
 
 0.748
AMFR
E3 ubiquitin-protein ligase AMFR isoform X1.
    
 
 0.742
EMC1
ER membrane protein complex subunit 1 isoform X1.
    
 
 0.632
EMC3
ER membrane protein complex subunit 3.
    
 
 0.631
SYVN1
Synoviolin 1.
    
 
 0.617
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.