Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDX4Peroxiredoxin-4 isoform X1. (284 aa)    
Predicted Functional Partners:
PRDX5
Peroxiredoxin-5, mitochondrial.
   
 0.853
TXNDC5
Thioredoxin domain-containing protein 5.
  
 0.822
PDIA6
LOW QUALITY PROTEIN: protein disulfide-isomerase A6.
  
 0.804
SRXN1
Sulfiredoxin-1.
   
 0.801
ERP44
Endoplasmic reticulum resident protein 44.
  
 0.801
ENSPCIP00000041935
Thioredoxin-like.
  
 0.768
ENSPCIP00000048849
Thioredoxin domain-containing protein 2-like isoform X1.
  
 0.768
PRDX2
Peroxiredoxin 2/4.
   
   0.654
PRDX1
Peroxiredoxin 1.
   
   0.654
NME9
Thioredoxin domain-containing protein 6.
  
 0.645
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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