STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX32LOW QUALITY PROTEIN: sorting nexin-32. (391 aa)    
Predicted Functional Partners:
SNX5
Sorting nexin 5.
  
0.959
SNX2
Sorting nexin-2 isoform X1.
   
 0.925
SNX1
Sorting nexin-1/2.
   
 0.909
SNX6
Sorting nexin-5/6/32.
  
  
 
0.901
GAK
LOW QUALITY PROTEIN: cyclin-G-associated kinase.
     
  0.758
SNX4
Sorting nexin-4.
   
 0.705
SNX27
Sorting nexin-27 isoform X1.
    
 
 0.701
SNX8
Sorting nexin-8 isoform X1.
   
 0.697
SNX7
Sorting nexin-7/30.
   
 0.672
VPS35
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 35.
   
 
 0.651
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.