Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDHR5Cadherin-related family member 5. (789 aa)    
Predicted Functional Partners:
CDHR2
Cadherin-related family member 2.
   
 0.994
CDH23
Cadherin-23 isoform X1.
   
0.943
USH1C
USH1 protein network component harmonin.
   
 
 0.883
CDH17
LOW QUALITY PROTEIN: cadherin-17.
   
 
0.816
CDH8
Cadherin 8, type 2.
   
 0.781
CDHR1
Cadherin-related family member 1 isoform X1.
   
0.780
FAT4
LOW QUALITY PROTEIN: protocadherin Fat 4.
   
0.780
CDH11
Cadherin 11, type 2, OB-cadherin.
   
 0.780
CDH7
Cadherin 7, type 2.
   
 0.780
CTNNA1
Catenin alpha-1.
   
 0.700
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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