Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RASSF7Ras association domain-containing protein 7 isoform X1. (424 aa)    
Predicted Functional Partners:
PPP1R13B
Protein phosphatase 1 regulatory subunit 13B.
    
 
 0.924
ENSPCIP00000052893
Interleukin-10 receptor subunit beta-like.
    
 
 0.856
GNPTAB
N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X1.
    
   0.816
NCK2
Cytoplasmic protein NCK2 isoform X1.
    
   0.756
PARD3
Partitioning defective 3 homolog isoform X1.
    
 
 0.743
ENSPCIP00000021192
annotation not available
    
 
 0.743
FRMD6
FERM domain-containing protein 6 isoform X1.
    
 
 0.701
SIPA1L1
LOW QUALITY PROTEIN: signal-induced proliferation-associated 1-like protein 1.
      
 0.616
PPP1R7
Protein phosphatase 1 regulatory subunit 7.
      
 0.598
PDZD4
PDZ domain-containing protein 4 isoform X1.
   
  
 0.595
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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