Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNIH2Protein cornichon homolog 2. (490 aa)    
Predicted Functional Partners:
GRIA1
Glutamate receptor 1 isoform X1.
   
 0.951
GRIA3
Glutamate receptor 3 isoform X1.
   
 0.789
GRIA4
Glutamate receptor 4 isoform X1.
   
 0.767
ENSPCIP00000019083
annotation not available
   
 0.750
GRIA2
LOW QUALITY PROTEIN: glutamate receptor 2.
   
 0.750
ENSPCIP00000050093
annotation not available
   
 0.750
PRRT1
Proline-rich transmembrane protein 1 isoform X1.
    
 
 0.722
TMED10
Transmembrane emp24 domain-containing protein 10.
   
 0.672
STX5
Syntaxin 5.
    
 0.669
SEC24D
Protein transport protein Sec24D.
     
 0.665
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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