Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRMS1Breast cancer metastasis-suppressor 1 and related proteins. (278 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interactive domain-containing protein 4A.
   
 0.988
SAP30L
Histone deacetylase complex subunit SAP30L.
   
 0.977
SAP30
LOW QUALITY PROTEIN: histone deacetylase complex subunit SAP30.
   
 0.976
SINHCAF
Protein FAM60A.
    
 
 0.920
ING2
Inhibitor of growth protein 2.
    
 
 0.886
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 0.884
HDAC2
Histone deacetylase 1/2.
    
 0.875
HDAC1
Histone deacetylase 1/2.
    
 0.875
ING1
Inhibitor of growth protein 1 isoform X1.
    
 
 0.869
NMI
N-myc-interactor.
    
   0.846
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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