Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RFX2DNA-binding protein RFX2 isoform X1. (697 aa)    
Predicted Functional Partners:
RFX3
Transcription factor RFX3 isoform X1.
   
   0.976
FOXJ1
Forkhead box protein J1.
    
 
 0.932
FBXL3
F-box and leucine-rich repeat protein 3.
    
   0.818
ODF3B
LOW QUALITY PROTEIN: outer dense fiber protein 3B.
      
 0.627
ATR
LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR.
    
 
 0.626
ALOX5AP
Arachidonate 5-lipoxygenase-activating protein isoform X1.
      
 0.622
ABCG4
ATP-binding cassette sub-family G member 4 isoform X1.
      
 0.620
PDCL3
Phosducin-like protein 3.
      
 0.616
CCNO
Uracil-DNA glycosylase 2.
   
  
 0.609
BTAF1
TATA-binding protein-associated factor 172 isoform X1.
    
   0.584
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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