ENSPCIP00000010441 protein (Phascolarctos cinereus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPCIP00000010441

annotation not available (121 aa)

Predicted Functional Partners:

ENSPCIP00000037765

0.516

ENSPCIP00000037767

0.493

ENSPCIP00000042993

0.487

ENSPCIP00000029569

0.470

ENSPCIP00000029565

0.466

ENSPCIP00000037760

0.466

ENSPCIP00000052535

0.444

ENSPCIP00000029556

0.434

ENSPCIP00000048217

0.414

ENSPCIP00000029563

0.409

Your Current Organism:

Phascolarctos cinereus

NCBI taxonomy Id: 38626
Other names: P. cinereus, koala

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSPCIP00000010441	ENSPCIP00000029556	annotation not available	annotation not available	0.434
ENSPCIP00000010441	ENSPCIP00000029563	annotation not available	annotation not available	0.409
ENSPCIP00000010441	ENSPCIP00000029565	annotation not available	annotation not available	0.466
ENSPCIP00000010441	ENSPCIP00000029569	annotation not available	annotation not available	0.470
ENSPCIP00000010441	ENSPCIP00000037760	annotation not available	annotation not available	0.466
ENSPCIP00000010441	ENSPCIP00000037765	annotation not available	annotation not available	0.516
ENSPCIP00000010441	ENSPCIP00000037767	annotation not available	annotation not available	0.493
ENSPCIP00000010441	ENSPCIP00000042993	annotation not available	annotation not available	0.487
ENSPCIP00000010441	ENSPCIP00000048217	annotation not available	annotation not available	0.414
ENSPCIP00000010441	ENSPCIP00000052535	annotation not available	annotation not available	0.444
ENSPCIP00000029556	ENSPCIP00000010441	annotation not available	annotation not available	0.434
ENSPCIP00000029556	ENSPCIP00000029563	annotation not available	annotation not available	0.469
ENSPCIP00000029556	ENSPCIP00000029569	annotation not available	annotation not available	0.474
ENSPCIP00000029563	ENSPCIP00000010441	annotation not available	annotation not available	0.409
ENSPCIP00000029563	ENSPCIP00000029556	annotation not available	annotation not available	0.469
ENSPCIP00000029563	ENSPCIP00000029565	annotation not available	annotation not available	0.477
ENSPCIP00000029565	ENSPCIP00000010441	annotation not available	annotation not available	0.466
ENSPCIP00000029565	ENSPCIP00000029563	annotation not available	annotation not available	0.477
ENSPCIP00000029565	ENSPCIP00000029569	annotation not available	annotation not available	0.476
ENSPCIP00000029565	ENSPCIP00000037760	annotation not available	annotation not available	0.405