STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNJ2BPSynaptojanin-2-binding protein. (145 aa)    
Predicted Functional Partners:
RAB3IP
LOW QUALITY PROTEIN: rab-3A-interacting protein.
    
 0.699
COX16
Cytochrome c oxidase assembly protein COX16 homolog, mitochondrial isoform X1.
 
    
 0.680
CATSPER2
Cation channel sperm-associated protein 2 isoform X1.
    
 0.633
ENSPCIP00000000789
annotation not available
    
 0.598
CATSPERD
Cation channel sperm-associated protein subunit delta isoform X1.
    
 
 0.575
DCAF10
DDB1- and CUL4-associated factor 10.
      
 0.557
C17orf75
Protein Njmu-R1.
      
 0.557
ENSPCIP00000014546
Cation channel sperm-associated protein subunit beta-like.
    
 0.545
IFT57
Intraflagellar transport protein 57 homolog.
    
 0.533
IFT172
Intraflagellar transport protein 172 homolog isoform X1.
    
 0.527
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.