STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAPDHGlyceraldehyde 3-phosphate dehydrogenase. (333 aa)    
Predicted Functional Partners:
TPI1
Triosephosphate isomerase (TIM).
 
 0.996
PGK1
LOW QUALITY PROTEIN: phosphoglycerate kinase 1.
 
 0.977
ENSPCIP00000015981
Phosphoglycerate kinase 1-like.
 
 0.971
ALDOA
Fructose-bisphosphate aldolase, class I.
  
 0.966
ALDOB
Fructose-bisphosphate aldolase, class I.
  
 0.956
ALDOC
Fructose-bisphosphate aldolase, class I.
  
 0.954
BPGM
Bisphosphoglycerate/phosphoglycerate mutase.
   
 0.945
TALDO1
Transaldolase.
  
 
 0.937
H6PD
GDH/6PGL endoplasmic bifunctional protein isoform X1.
  
 0.937
GPI
Glucose-6-phosphate isomerase.
  
 
 0.922
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.