STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAPDHGlyceraldehyde 3-phosphate dehydrogenase. (333 aa)    
Predicted Functional Partners:
TPI1
Triosephosphate isomerase (TIM).
 
 0.999
PGK1
LOW QUALITY PROTEIN: phosphoglycerate kinase 1.
  
 0.984
ENSPCIP00000015981
Phosphoglycerate kinase 1-like.
  
 0.980
ALDOA
Fructose-bisphosphate aldolase, class I.
  
 0.973
ALDOB
Fructose-bisphosphate aldolase, class I.
  
 0.955
ALDOC
Fructose-bisphosphate aldolase, class I.
  
 0.955
BPGM
Bisphosphoglycerate/phosphoglycerate mutase.
   
 0.948
TALDO1
Transaldolase.
  
 0.929
PARP1
Poly [ADP-ribose] polymerase 1.
    
 0.927
GPI
Glucose-6-phosphate isomerase.
  
 0.919
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.