Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CPVLProbable serine carboxypeptidase CPVL isoform X1. (515 aa)    
Predicted Functional Partners:
CAPZB
Capping protein (actin filament) muscle Z-line, beta.
   
   0.777
NEU1
Sialidase-1.
   
 0.627
SKAP2
Src kinase-associated phosphoprotein 2 isoform X1.
      
 0.625
TUSC3
Oligosaccharyltransferase complex subunit gamma.
    
 
 0.619
MAGT1
Magnesium transporter protein 1.
    
 
 0.619
NEXN
Nexilin isoform X1.
    
 
 0.618
VPS26A
Vacuolar protein sorting-associated protein 26A isoform X1.
    
 
 0.614
VPS26B
Vacuolar protein sorting-associated protein 26B.
    
 
 0.614
DCTN2
Dynactin subunit 2 isoform X1.
    
   0.605
NR3C1
Glucocorticoid receptor isoform X1.
    
   0.605
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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