Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMO7LOW QUALITY PROTEIN: LIM domain only protein 7. (1409 aa)    
Predicted Functional Partners:
AFDN
Afadin isoform X1.
   
 0.921
ACTN1
Alpha-actinin-1 isoform X1.
   
 0.919
ACTN4
Alpha-actinin-4 isoform X1.
   
 0.919
COMMD6
COMM domain-containing protein 6 isoform X1.
     
 0.763
ANLN
Actin-binding protein anillin.
    
   0.758
FBXO47
F-box only protein 47 isoform X1.
      
 0.681
CNN3
Calponin-3.
   
 
 0.640
EMD
Emerin.
    
 
 0.619
SEPTIN9
Septin-9 isoform X1.
    
   0.589
DCUN1D3
DCN1-like protein 3.
     
  0.584
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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