STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM14RNA-binding protein 14 isoform X1. (675 aa)    
Predicted Functional Partners:
TMEM50A
Transmembrane protein 50A.
    
 
 0.478
DLGAP3
Disks large-associated protein 3 isoform X1.
  
 
   0.463
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.453
NCBP1
Nuclear cap-binding protein subunit 1.
    
 0.450
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.405
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 0.403
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.