Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RUNX3LOW QUALITY PROTEIN: runt-related transcription factor 3. (393 aa)    
Predicted Functional Partners:
ENSPCIP00000001226
T-box transcription factor TBX21-like.
   
 0.940
CBFB
Core-binding factor subunit beta isoform X1.
    
 0.938
TAL1
T-cell acute lymphocytic leukemia protein 1.
    
 0.836
EP300
E1A binding protein p300.
    
 0.832
CDK6
Cyclin-dependent kinase 6 isoform X1.
    
 0.810
ETS1
Protein C-ets-1 isoform X1.
   
 0.790
PML
Probable transcription factor PML.
    
 0.787
STUB1
STIP1 homology and U-box containing protein 1.
    
 0.787
CREBBP
LOW QUALITY PROTEIN: CREB-binding protein.
    
 0.764
GATA3
Trans-acting T-cell-specific transcription factor GATA-3 isoform X1.
    
 0.754
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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