Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000010552Protein FAM111A-like. (652 aa)    
Predicted Functional Partners:
VPS39
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39.
      
 0.753
FBXW7
F-box/WD repeat-containing protein 7 isoform X1.
      
 0.674
NUP42
Nucleoporin-like protein 2.
     
 0.588
NHEJ1
Non-homologous end-joining factor 1 isoform X1.
      
 0.567
RDM1
RAD52 motif-containing protein 1 isoform X1.
      
 0.553
DFFB
DNA fragmentation factor subunit beta isoform X1.
    
   0.537
CPT2
Carnitine O-palmitoyltransferase 2, mitochondrial isoform X1.
      
 0.531
ASXL1
Putative Polycomb group protein ASXL1 isoform X1.
     
 0.521
SPRTN
SprT-like domain-containing protein Spartan.
   
 
 0.513
SET
Template-activating factor I.
   
   0.510
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.