STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000010552Protein FAM111A-like. (652 aa)    
Predicted Functional Partners:
VPS39
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39.
   
  
 0.601
FBXW7
F-box/WD repeat-containing protein 7 isoform X1.
      
 0.553
RDM1
RAD52 motif-containing protein 1 isoform X1.
      
 0.491
NHEJ1
Non-homologous end-joining factor 1 isoform X1.
      
 0.461
CPT2
Carnitine O-palmitoyltransferase 2, mitochondrial isoform X1.
      
 0.461
TBX6
T-box transcription factor TBX6 isoform X1.
      
 0.461
NUP214
Nucleoporin 214.
     
 0.456
ZNF367
Zinc finger protein 367.
   
  
 0.416
RFC3
Replication factor C subunit 3/5.
      
 0.412
BIRC5
Baculoviral IAP repeat-containing protein 5 isoform X1.
   
  
 0.403
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.