STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCBP3Nuclear cap-binding protein subunit 3 isoform X1. (649 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap-binding protein subunit 1.
    
 
 0.953
ZC3H11A
Zinc finger CCCH domain-containing protein 11A isoform X1.
   
 
 0.933
SRRT
Serrate RNA effector molecule homolog isoform X1.
   
 
 0.894
CHTOP
Chromatin target of PRMT1 protein isoform X1.
   
 
 0.891
THOC7
THO complex subunit 7 homolog.
    
 
 0.878
THOC1
THO complex subunit 1 isoform X1.
   
 
 0.871
ALYREF
THO complex subunit 4.
    
 
 0.871
THOC2
THO complex subunit 2 isoform X1.
   
 
 0.866
THOC5
THO complex 5.
   
 
 0.865
PNN
Pinin.
   
   0.850
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.