Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A4Solute carrier family 4 (sodium bicarbonate cotransporter), member 4. (1079 aa)    
Predicted Functional Partners:
GC
GC vitamin D binding protein.
      
 0.720
NPFFR2
LOW QUALITY PROTEIN: neuropeptide FF receptor 2.
      
 0.699
AHCYL1
Adenosylhomocysteinase 2 isoform X1.
    
 
 0.677
AHCYL2
Adenosylhomocysteinase like 2.
    
 
 0.677
NPHS2
Podocin.
    
 0.602
EVC
Ellis-van Creveld syndrome protein isoform X1.
   
 
 0.552
HECTD4
Probable E3 ubiquitin-protein ligase HECTD4 isoform X1.
      
 0.538
CA2
Carbonic anhydrase 2 isoform X1.
   
 
 0.514
SLC9A1
Solute carrier family 9 (sodium/hydrogen exchanger), member 1.
    
 
 0.507
SLC26A6
Solute carrier family 26 (sulfate anion transporter), member 6.
      
 0.502
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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