STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A4Solute carrier family 4 (sodium bicarbonate cotransporter), member 4. (1079 aa)    
Predicted Functional Partners:
NPFFR2
LOW QUALITY PROTEIN: neuropeptide FF receptor 2.
      
 0.631
CA2
Carbonic anhydrase 2 isoform X1.
   
 
 0.603
GC
GC vitamin D binding protein.
      
 0.564
DNALI1
Axonemal dynein light intermediate polypeptide 1 isoform X1.
   
  
 0.490
NPHS2
Podocin.
    
 0.485
CYP24A1
1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial.
   
  
 0.447
CYP27B1
Calcidiol 1-monooxygenase (25-hydroxyvitamin D3 1alpha-hydroxylase).
   
  
 0.432
CYB5D1
Cytochrome b5 domain-containing protein 1.
   
  
 0.426
ARHGAP1
Rho GTPase-activating protein 1 isoform X1.
     
 0.423
TTC6
Tetratricopeptide repeat domain 6.
   
    0.414
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.