STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3GAP2LOW QUALITY PROTEIN: rab3 GTPase-activating protein non-catalytic subunit. (1278 aa)    
Predicted Functional Partners:
RAB3GAP1
Rab3 GTPase-activating protein catalytic subunit isoform X1.
   
 0.987
RAB18
Ras-related protein Rab-18.
     
 0.758
DCTN4
Dynactin subunit 4.
   
 
  0.580
DCTN5
Dynactin subunit 5 isoform X1.
   
 
  0.565
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
  
 0.564
MKX
Homeobox protein Mohawk isoform X1.
      
 0.532
ENSPCIP00000003143
annotation not available
   
 
 0.531
ENSPCIP00000034016
Rab proteins geranylgeranyltransferase component A 1-like.
   
 
 0.531
ENSPCIP00000027549
LOW QUALITY PROTEIN: rab GDP dissociation inhibitor alpha-like.
     
 0.497
GDI2
Rab GDP dissociation inhibitor beta.
     
 0.497
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.