Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRT4Keratin, type II cytoskeletal 4-like. (516 aa)    
Predicted Functional Partners:
ANKRD65
LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 65.
    
 0.711
KRT13
Keratin, type I cytoskeletal 13.
   
 0.700
ENSPCIP00000049142
annotation not available
   
 0.700
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.590
TGM1
Protein-glutamine gamma-glutamyltransferase K isoform X1.
   
 0.541
SERPINB12
Serpin family B member 12.
   
 0.533
ENSPCIP00000005450
annotation not available
   
 0.517
COPS3
COP9 signalosome complex subunit 3 isoform X1.
    
 0.438
WNT11
Wingless-type MMTV integration site family, member 11.
    
 0.432
LRIT1
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
 0.432
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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