Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD4Neurogenic differentiation factor 4. (334 aa)    
Predicted Functional Partners:
TCF3
Transcription factor E2-alpha isoform X1.
    
 
 0.707
PAX6
Paired box protein Pax-6 isoform X1.
   
 0.620
TCF12
Transcription factor 12 isoform X1.
    
 
 0.495
TCF4
Transcription factor 4 isoform X1.
    
 
 0.495
INSM2
INSM transcriptional repressor 2.
   
 0.493
INSM1
INSM transcriptional repressor 1.
   
 0.493
NES
Nestin isoform X1.
      
 0.484
ENSPCIP00000019710
annotation not available
   
  
 0.478
EP300
E1A binding protein p300.
    
 
 0.469
RFX6
DNA-binding protein RFX6 isoform X1.
   
  
 0.456
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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