STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YLPM1YLP motif-containing protein 1 isoform X1. (2201 aa)    
Predicted Functional Partners:
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
   
 
  0.701
ZNF318
Zinc finger protein 318 isoform X1.
   
  
 0.569
FCF1
RRNA-processing protein FCF1 homolog isoform X1.
 
   
 0.520
HEATR1
U3 small nucleolar RNA-associated protein 10.
      
 0.506
BPNT1
3'(2'),5'-bisphosphate nucleotidase 1 isoform X1.
      
 0.450
RBM12B
RNA-binding protein 12B.
      
 0.443
ENSPCIP00000054489
annotation not available
      
 0.443
DDX50
ATP-dependent RNA helicase DDX50 isoform X1.
   
 
 0.427
AREL1
Apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X1.
   
  
 0.427
BPIFB2
BPI fold-containing family B member 2.
      
 0.416
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.