Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC2HC1CZinc finger C2HC domain-containing protein 1C isoform X1. (529 aa)    
Predicted Functional Partners:
RBM25
RNA-binding protein 25 isoform X1.
   
 0.821
IFT88
Intraflagellar transport 88.
   
  0.720
IFT46
Intraflagellar transport protein 46 homolog isoform X1.
    
   0.697
MLH3
LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3.
      
 0.629
U2AF2
Splicing factor U2AF 65 kDa subunit isoform X1.
    
 
 0.616
SF3B2
Splicing factor 3B subunit 2 isoform X1.
   
 
 0.612
SF3B3
Splicing factor 3B subunit 3.
    
 
 0.609
CDC5L
Cell division cycle 5-like protein.
   
 
 0.609
LEO1
RNA polymerase-associated protein LEO1.
   
 
 0.604
RNF20
E3 ubiquitin-protein ligase BRE1A.
   
 0.592
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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