STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC2HC1CZinc finger C2HC domain-containing protein 1C isoform X1. (529 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1.
   
 
 0.924
RBM25
RNA-binding protein 25 isoform X1.
   
 
 0.833
CDC5L
Cell division cycle 5-like protein.
   
 
 0.801
U2AF2
Splicing factor U2AF 65 kDa subunit isoform X1.
    
 
 0.742
PRPF39
Pre-mRNA-processing factor 39 isoform X1.
    
 
 0.708
SF3B2
Splicing factor 3B subunit 2 isoform X1.
   
 
 0.705
SF3B3
Splicing factor 3B subunit 3.
    
 
 0.695
SNRNP70
U1 small nuclear ribonucleoprotein 70 kDa isoform X1.
   
 
 0.681
SNRNP35
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 
 0.681
SART1
LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated protein 1.
   
   0.657
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.