STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOR3REST corepressor 3 isoform X1. (552 aa)    
Predicted Functional Partners:
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
   
 0.934
HMG20B
High mobility group 20B.
   
 0.799
PHF21A
LOW QUALITY PROTEIN: PHD finger protein 21A.
   
 0.793
KDM1B
Lysine-specific histone demethylase 1B isoform X1.
   
 0.768
REST
RE1-silencing transcription factor.
    
 0.759
MAOB
Amine oxidase [flavin-containing] B isoform X1.
   
 0.751
MAOA
LOW QUALITY PROTEIN: amine oxidase [flavin-containing] A.
   
 0.751
ENSPCIP00000021413
L-amino-acid oxidase-like.
   
 0.714
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
  0.700
ARID4A
AT-rich interactive domain-containing protein 4A.
   
  0.696
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.