Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASTE1Protein asteroid homolog 1. (672 aa)    
Predicted Functional Partners:
SLC23A2
Solute carrier family 23 (nucleobase transporter), member 2.
   
  
 0.651
POC1B
POC1 centriolar protein homolog B isoform X1.
    
 0.622
MAD2L2
Mitotic spindle assembly checkpoint protein MAD2B isoform X1.
    
 
 0.602
TUBGCP2
Gamma-tubulin complex component 2 isoform X1.
      
 0.580
CTXN1
Cortexin-1.
      
 0.513
NEK11
NIMA (never in mitosis gene a)-related kinase 11.
   
 0.504
RIF1
Replication timing regulatory factor 1.
   
 0.502
ENSPCIP00000046034
annotation not available
   
 0.495
MUS81
Crossover junction endonuclease MUS81 isoform X1.
    
 0.485
TMEM108
LOW QUALITY PROTEIN: transmembrane protein 108.
      
 0.476
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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