STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBPL1Transcription initiation factor TFIID TATA-box-binding protein. (186 aa)    
Predicted Functional Partners:
GTF2B
Transcription initiation factor TFIIB.
   
 0.995
TAF2
Transcription initiation factor TFIID subunit 2 isoform X1.
    
 0.941
TAF12
Transcription initiation factor TFIID subunit 12 isoform X1.
    
 0.941
TAF10
TATA-box binding protein associated factor 10.
    
 0.941
ENSPCIP00000036531
annotation not available
    
 0.941
TAF13
Transcription initiation factor TFIID subunit 13.
   
 0.939
GTF2A2
LOW QUALITY PROTEIN: transcription initiation factor IIA subunit 2.
   
 0.936
GTF2A1L
Transcription initiation factor TFIIA large subunit.
   
 0.935
GTF2E1
Transcription initiation factor TFIIE subunit alpha.
   
 0.931
POLR2E
DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1.
    
 0.926
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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