STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHD3EH domain-containing protein 3. (550 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn-5.
    
 0.984
SNAP29
Synaptosomal-associated protein 29.
    
 
 0.642
ANKFY1
Rabankyrin-5 isoform X1.
    
 
 0.613
RAB11FIP2
Rab11 family-interacting protein 2 isoform X1.
   
 
 0.552
VPS45
Vacuolar protein sorting 45 homolog.
     
 0.546
PDCD6IP
Programmed cell death 6-interacting protein.
   
 
 0.490
EHD2
LOW QUALITY PROTEIN: EH domain-containing protein 2.
   
   0.459
PACSIN2
Protein kinase C and casein kinase substrate in neurons protein 2 isoform X1.
   
 
 0.449
ST3GAL6
Neolactotetraosylceramide alpha-2,3-sialyltransferase (sialyltransferase 10).
      
 0.439
ARID5B
AT-rich interactive domain-containing protein 5B isoform X1.
    
 
 0.429
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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