Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NRXN1Neurexin-1 isoform X1. (847 aa)    
Predicted Functional Partners:
ENSPCIP00000020150
LOW QUALITY PROTEIN: neurexin-3-beta-like.
 
   
  0.989
NLGN2
LOW QUALITY PROTEIN: neuroligin-2.
   
 0.978
NLGN3
LOW QUALITY PROTEIN: neuroligin-3.
   
 0.977
NLGN4X
Neuroligin-4, X-linked isoform X1.
   
 0.956
NLGN1
LOW QUALITY PROTEIN: neuroligin-1.
   
 0.956
ENSPCIP00000010901
annotation not available
 
      0.900
NRXN2
LOW QUALITY PROTEIN: neurexin-2-beta.
  
  
 
0.900
ENSPCIP00000021042
annotation not available
 
     
0.899
CASK
Calcium/calmodulin-dependent serine protein kinase.
   
 0.729
DNM1
Dynamin-1 isoform X1.
   
  
 0.638
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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