Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ECM1LOW QUALITY PROTEIN: extracellular matrix protein 1. (355 aa)    
Predicted Functional Partners:
CLEC17A
C-type lectin domain family 17, member A.
     
 0.851
MRPS14
28S ribosomal protein S14, mitochondrial isoform X1.
      
 0.841
SLC39A13
Solute carrier family 39 (zinc transporter), member 13.
      
 0.841
PRL
Prolactin.
      
 0.824
BMS1
LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1 homolog.
      
 0.798
ZBTB44
Zinc finger and BTB domain-containing protein 44 isoform X1.
    
 
 0.748
CLEC3B
C-type lectin domain family 3 member B.
   
 
 0.639
ZSWIM8
Zinc finger SWIM domain-containing protein 8 isoform X1.
      
 0.625
ENSPCIP00000005329
annotation not available
      
 0.618
SLC15A2
Solute carrier family 15 (oligopeptide transporter), member 2.
      
 0.618
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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