Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB11FIP1RAB11 family interacting protein 1. (1150 aa)    
Predicted Functional Partners:
RAB11A
Ras-related protein Rab-11A.
    
 0.898
RAB11B
Ras-related protein Rab-11B isoform X1.
    
 0.898
RAB14
Ras-related protein Rab-14.
    
 0.838
MYO5B
Unconventional myosin-Vb isoform X1.
   
 0.771
N4BP1
NEDD4-binding protein 1.
      
 0.754
RAB25
Ras-related protein Rab-25.
   
 0.732
ENSPCIP00000038802
annotation not available
   
 0.732
RAB11FIP3
Rab11 family-interacting protein 3 isoform X1.
    
 
 0.730
MYO5A
Unconventional myosin-Va isoform X1.
   
 0.663
ENSPCIP00000006081
Unconventional myosin-Vc-like.
   
 0.663
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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