STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTSL4ADAMTS-like protein 4 isoform X1. (1119 aa)    
Predicted Functional Partners:
FBN1
Fibrillin 1.
    
 0.612
B3GLCT
UDP-glucose:O-linked fucose beta-1,3-glucosyltransferase.
     
 0.591
POFUT2
GDP-fucose protein O-fucosyltransferase 2.
     
 0.508
P3H2
Procollagen-proline 3-dioxygenase 2.
      
 0.461
ADAM11
Disintegrin and metalloproteinase domain-containing protein 11 isoform X1.
    
 
 0.436
MFAP4
Microfibril-associated glycoprotein 4 isoform X1.
   
  
 0.416
SPON1
LOW QUALITY PROTEIN: spondin-1.
     
0.414
ECM1
LOW QUALITY PROTEIN: extracellular matrix protein 1.
  
   
 0.404
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.