STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBL7Ubiquitin like 7. (411 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2.
    
 0.926
NBR1
Next to BRCA1 gene 1 protein isoform X1.
   
 0.833
ENSPCIP00000046432
annotation not available
   
 0.826
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 0.823
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.822
UBXN7
UBX domain-containing protein 7.
    
 0.787
TRAF7
TNF receptor associated factor 7.
    
 0.776
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 0.767
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
   
 0.760
PSMD13
26S proteasome non-ATPase regulatory subunit 13.
   
 0.753
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.