Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBL7Ubiquitin like 7. (411 aa)    
Predicted Functional Partners:
UBE4B
Ubiquitin conjugation factor E4 B isoform X1.
   
 0.933
ERCC1
DNA excision repair protein ERCC-1.
   
 0.869
ZNF428
Zinc finger protein 428.
      
 0.816
MAS1
Proto-oncogene Mas-like.
    
 0.786
UBE4A
Ubiquitin conjugation factor E4 A isoform X1.
   
 0.782
CIAPIN1
Anamorsin isoform X1.
   
 
 0.777
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
    
 0.772
SLC44A3
Solute carrier family 44 (choline transporter-like protein), member 3.
   
  
 0.762
UBC
LOW QUALITY PROTEIN: polyubiquitin-C.
    
 0.751
ENSPCIP00000043051
LOW QUALITY PROTEIN: polyubiquitin-C-like.
    
 0.751
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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