STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA1LOW QUALITY PROTEIN: liprin-alpha-1. (1115 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis protein 2 isoform X1.
   
 0.968
CASK
Calcium/calmodulin-dependent serine protein kinase.
    
 0.809
GIT1
G protein-coupled receptor kinase interactor 1.
    
 
 0.692
PPFIBP1
Liprin-beta-1 isoform X1.
   
0.667
PPFIBP2
Liprin-beta-2 isoform X1.
   
0.667
GIT2
G protein-coupled receptor kinase interactor 2.
    
 
 0.580
MPP1
Membrane palmitoylated protein 1.
    
 0.565
PTPRD
LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase delta-like.
   
 0.538
UNC13B
Protein unc-13 homolog B isoform X1.
    
 0.535
ENSPCIP00000034165
annotation not available
    
 0.535
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.