Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EXOSC4Exosome complex component RRP41. (245 aa)    
Predicted Functional Partners:
EXOSC2
Exosome complex component RRP4 isoform X1.
 
 
 0.996
EXOSC1
Exosome complex component CSL4 isoform X1.
   
 0.993
EXOSC3
Exosome complex component RRP40.
  
 0.993
EXOSC8
Exosome complex component RRP43.
  
 0.993
EXOSC7
Exosome component 7.
  
 0.993
EXOSC10
Exosome complex exonuclease RRP6.
   
 0.981
DIS3
Exosome complex exonuclease DIS3/RRP44.
   
 0.978
EXOSC5
Exosome complex component RRP46.
   
0.973
EXOSC9
Exosome complex component RRP45 isoform X1.
   
 0.973
MTREX
Superkiller viralicidic activity 2-like 2.
   
 0.971
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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