Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ERGIC2Endoplasmic reticulum-Golgi intermediate compartment protein 2 isoform X1. (378 aa)    
Predicted Functional Partners:
GTPBP3
TRNA modification GTPase GTPBP3, mitochondrial.
  
 0.938
ERGIC3
ERGIC and golgi 3.
   
 
 0.921
SURF4
ER-derived vesicles protein.
    
 
 0.826
COPB1
Coatomer subunit beta.
   
   0.803
COPE
Coatomer subunit epsilon.
   
 
 0.788
SPCS1
Signal peptidase complex subunit 1.
   
   0.783
COPA
Coatomer subunit alpha.
   
 
 0.776
ERO1B
ERO1-like protein beta.
   
 
 0.772
DERL3
Derlin-3 isoform X1.
   
 
 0.766
DERL2
Derlin-2/3.
   
 
 0.766
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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