STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000011351Interferon-induced protein with tetratricopeptide repeats 5-like. (481 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1.
    
 0.845
BBS9
Bardet-Biedl syndrome 9 protein.
    
 0.587
TEP1
Telomerase associated protein 1.
   
 0.583
BBS7
Bardet-Biedl syndrome 7 protein isoform X1.
   
 0.577
ISG15
Ubiquitin cross-reactive protein.
   
 0.565
USP18
Ubl carboxyl-terminal hydrolase 18 isoform X1.
   
 0.556
RSAD2
Radical S-adenosyl methionine domain-containing protein 2.
   
 
 0.532
TTC8
LOW QUALITY PROTEIN: tetratricopeptide repeat protein 8.
    
 0.531
ND4
NADH-ubiquinone oxidoreductase chain 4.
   
 
 0.524
IFIH1
Interferon-induced helicase C domain-containing protein 1.
   
 0.521
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.