STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P3H1Procollagen-proline 3-dioxygenase 1. (802 aa)    
Predicted Functional Partners:
PPIB
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
   
 0.890
CRTAP
Cartilage-associated protein.
   
0.808
P3H4
Endoplasmic reticulum protein SC65.
   
0.787
WDR19
WD repeat-containing protein 19 isoform X1.
      
 0.696
COL1A2
Collagen alpha-2(I) chain.
   
 0.683
COL1A1
Collagen alpha-1(I) chain.
   
 0.681
SLC26A2
Solute carrier family 26 (sulfate anion transporter), member 2.
      
 0.676
P4HB
Prolyl 4-hydroxylase subunit beta.
   
 0.622
SERPINH1
Serpin peptidase inhibitor, clade H, member 1.
   
 
 0.592
FGFR3
Fibroblast growth factor receptor 3 isoform X1.
   
  
 0.564
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.