Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RITA1RBPJ-interacting and tubulin-associated protein 1. (292 aa)    
Predicted Functional Partners:
RBPJ
Recombining binding protein suppressor of hairless isoform X1.
    
 
 0.818
DCP1A
MRNA-decapping enzyme 1A.
    
   0.797
PPP2R3C
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1.
    
   0.708
COL4A2
Collagen alpha-2(IV) chain.
    
   0.588
MRPL15
39S ribosomal protein L15, mitochondrial.
      
 0.567
HIPK1
Homeodomain-interacting protein kinase 1 isoform X1.
      
 0.553
RBPJL
LOW QUALITY PROTEIN: recombining binding protein suppressor of hairless-like protein.
    
 
 0.539
MEGF11
Multiple epidermal growth factor-like domains protein 11 isoform X1.
      
 0.529
HIPK4
Homeodomain-interacting protein kinase 4 isoform X1.
      
 0.495
MEGF6
LOW QUALITY PROTEIN: multiple epidermal growth factor-like domains protein 6.
      
 0.475
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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