STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC3LOW QUALITY PROTEIN: kelch domain-containing protein 3-like. (392 aa)    
Predicted Functional Partners:
CUL2
Cullin 2.
    
 
 0.936
MOCS1
GTP 3',8-cyclase / cyclic pyranopterin monophosphate synthase.
    
   0.832
RRP36
Ribosomal RNA processing 36.
 
    
 0.798
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 
 0.764
UBXN7
UBX domain-containing protein 7.
    
   0.758
MEA1
Male-enhanced antigen 1 isoform X1.
      
 0.750
APPBP2
Amyloid protein-binding protein 2.
      
 0.743
SPATA4
Spermatogenesis-associated protein 4.
      
 0.625
TCP11
T-complex protein 11 homolog isoform X1.
      
 0.619
ELOB
Elongin-B.
    
 
 0.619
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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