Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KNOP1Lysine-rich nucleolar protein 1 isoform X1. (468 aa)    
Predicted Functional Partners:
GPR139
Probable G-protein coupled receptor 139.
      
 0.813
DRG1
Developmentally-regulated GTP-binding protein 1.
   
  
 0.744
DIPK2A
Deleted in autism protein 1.
      
 0.713
RPL3
Large subunit ribosomal protein L3e.
    
   0.708
ENSPCIP00000045132
annotation not available
    
   0.708
PUM3
Pumilio homology domain family member 6.
   
   0.696
STAU1
Staufen double-stranded RNA binding protein 1.
    
   0.692
RRP8
Ribosomal RNA-processing protein 8.
    
   0.654
FANK1
Fibronectin type III and ankyrin repeat domains 1.
      
 0.590
NSD2
LOW QUALITY PROTEIN: histone-lysine N-methyltransferase NSD2.
    
   0.589
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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