STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000011500annotation not available (135 aa)    
Predicted Functional Partners:
MRPL40
39S ribosomal protein L40, mitochondrial.
   
 
 0.924
MRPL58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
 
 0.911
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 
 0.907
MRPL30
39S ribosomal protein L30, mitochondrial.
   
 
 0.903
MRPL16
39S ribosomal protein L16, mitochondrial.
   
 0.901
MRPL24
Mitochondrial ribosomal protein L24.
   
   0.894
MRPL28
39S ribosomal protein L28, mitochondrial.
   
   0.889
MRPL52
39S ribosomal protein L52, mitochondrial.
   
 
 0.888
ENSPCIP00000047812
annotation not available
   
   0.887
MRPL4
39S ribosomal protein L4, mitochondrial.
   
   0.887
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.