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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARA5Scavenger receptor class A member 5 isoform X1. (495 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase 1.
      
 0.755
DAXX
Death domain-associated protein 6 isoform X1.
   
 0.720
GUK1
Guanylate kinase isoform X1.
    
 0.583
MMACHC
Cyanocobalamin reductase (cyanide-eliminating) / alkylcobalamin dealkylase.
      
 0.563
RNF146
E3 ubiquitin-protein ligase RNF146 isoform X1.
   
  
 0.561
PTPRK
Receptor-type tyrosine-protein phosphatase kappa isoform X1.
    
 0.529
MRPL55
39S ribosomal protein L55, mitochondrial.
      
 0.510
C1S
Complement component 1, s subcomponent.
    
 0.484
BRD2
LOW QUALITY PROTEIN: bromodomain-containing protein 2.
      
 0.481
APOB
Apolipoprotein B-100 isoform X1.
     
 0.465
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.