STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD23LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 23. (308 aa)    
Predicted Functional Partners:
ANKRD39
Ankyrin repeat domain-containing protein 39.
 
   
0.646
RPL3L
60S ribosomal protein L3-like isoform X1.
   
 
 0.553
PPP1R27
Protein phosphatase 1 regulatory subunit 27.
  
    0.539
ANKRD53
LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 53.
  
 
  0.536
ANKRD22
Ankyrin repeat domain-containing protein 22.
  
     0.489
TMEM38A
Trimeric intracellular cation channel type A.
   
  
 0.488
NFKBIB
NF-kappa-B inhibitor beta.
  
     0.477
ACTN3
Alpha-actinin-3 isoform X1.
   
 0.468
FAM102B
Family with sequence similarity 102 member B.
    
 
 0.465
TMEM37
Voltage-dependent calcium channel gamma-like subunit.
      
 0.461
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.