Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEX6Peroxisome biogenesis factor 6. (1072 aa)    
Predicted Functional Partners:
PEX1
LOW QUALITY PROTEIN: peroxisome biogenesis factor 1.
  
0.999
PEX26
Peroxisome assembly protein 26 isoform X1.
    
 0.998
PEX14
LOW QUALITY PROTEIN: peroxisomal membrane protein PEX14.
    
 0.962
PEX5
Peroxisomal biogenesis factor 5 isoform X1.
   
 0.959
PEX13
Peroxisome biogenesis factor 13.
    
 0.941
PEX12
Peroxisome assembly protein 12.
    
 0.915
PEX19
Peroxisomal biogenesis factor 19.
    
 0.913
PEX5L
PEX5-related protein isoform X1.
   
 0.894
PEX10
Peroxisome biogenesis factor 10 isoform X1.
   
 0.892
PEX7
Peroxisomal biogenesis factor 7.
     
 0.890
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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