STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB3Calcium and integrin-binding family member 3. (187 aa)    
Predicted Functional Partners:
TMC3
LOW QUALITY PROTEIN: transmembrane channel-like protein 3.
    
 0.787
TMC1
Transmembrane channel-like protein 1.
    
 0.787
ENSPCIP00000016254
annotation not available
    
 0.779
NEDD9
Enhancer of filamentation 1 isoform X1.
   
 0.709
TRIP13
Pachytene checkpoint protein 2 homolog isoform X1.
    
 
 0.702
SPICE1
Spindle and centriole-associated protein 1 isoform X1.
      
 0.690
LUM
Lumican.
    
 0.680
GRIN3A
Glutamate receptor ionotropic, NMDA 3A.
    
 0.676
PTPRG
LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase gamma.
    
 
 0.675
CASK
Calcium/calmodulin-dependent serine protein kinase.
    
 0.672
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.