Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ELAC2Zinc phosphodiesterase ELAC protein 2. (846 aa)    
Predicted Functional Partners:
TRMT10C
Mitochondrial ribonuclease P protein 1.
   
 
 0.953
SUPV3L1
ATP-dependent RNA helicase SUPV3L1, mitochondrial.
   
  
 0.806
RNF123
Kip1 ubiquitination-promoting complex protein 1.
    
   0.791
UBAC1
Ubiquitin-associated domain-containing protein 1.
    
   0.759
UTP20
LOW QUALITY PROTEIN: small subunit processome component 20 homolog.
   
  
 0.723
PWP2
Periodic tryptophan protein 2 homolog.
   
    0.705
HSD17B10
3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase.
    
 
 0.702
EXOG
Nuclease EXOG, mitochondrial.
   
 
 0.661
ENDOG
Endonuclease G, mitochondrial.
   
 
 0.661
TRMT10A
tRNA methyltransferase 10A.
 
 
 
 0.658
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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